{stdenv, fetchurl, readline}: stdenv.mkDerivation rec { # FIXME: replace Makefile so we can build MPI & MAC support name = "mrbayes-3.1.2"; src = fetchurl { url = "mirror://sourceforge/mrbayes/${name}.tar.gz"; sha256 = "1x7j8ca5wjrqrxmcpvd375ydm3s2pbkzykv8xfhg1jc037g560n6"; }; builder = ./builder.sh; buildInputs = [readline]; meta = { description = "Bayesian Inference of Phylogeny"; longDescription = ''Bayesian inference of phylogeny is based upon a quantity called the posterior probability distribution of trees, which is the probability of a tree conditioned on the observations. The conditioning is accomplished using Bayes's theorem. The posterior probability distribution of trees is impossible to calculate analytically; instead, MrBayes uses a simulation technique called Markov chain Monte Carlo (or MCMC) to approximate the posterior probabilities of trees.''; license = "GPL2"; homepage = http://mrbayes.csit.fsu.edu/; pkgMaintainer = http://biolib.open-bio.org; }; }